BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H05LP1|AL425939
(507 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1450 769 0.0
>3x_Contig1450
Length = 9648
Score = 769 bits (386), Expect = 0.0
Identities = 485/508 (95%), Gaps = 12/508 (2%)
Strand = Plus / Minus
Query: 1 gatcaagagattcaccatcatgatacattcaacaatttacagctgaaaaggcgtgtgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7203 gatcaagagattcaccatcatgatacattcaacaatttacagctgaaaaggcgtgtgagg 7144
Query: 61 ccttcattattgacaccgctttggaaaattggagcattcgcaatgggttctgggacagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7143 ccttcattattgacaccgctttggaaaattggagcattcgcaatgggttctgggacagct 7084
Query: 121 ttctttgtcaccagaagcgg-caatggcatgtcactggaagctgtcgaaactgttattgg 179
||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||
Sbjct: 7083 ttctt-gtcaccagaagcgggcaatggcatg-cac-ggaagctgtcgaaactgttattgg 7027
Query: 180 ggggcattataatgaccagcttcgctgtctcaacaatcaatattgaattgtgaatcagaa 239
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 7026 ggggcattataatgaccagcttcgctgtctcaacaatcaatat-gaattg-gaatcagaa 6969
Query: 240 gatggawctaaagttggacaaactgtagaattgaaaaatttacaagctactatcaaacaa 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6968 gatggaactaaagttggacaaactgtagaattgaaaaatttacaagctactatcaaacaa 6909
Query: 300 ttcagagacgaagawttggaacatttgcaaacagctwttgattacgattcgcataaggca 359
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6908 ttcagagacgaagaattggaacatttgcaaacagctattgattacgattcgcataaggca 6849
Query: 360 gtcccatacattcttttgacggaggggatcaagactgtttgcagagttgcgatttgggca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6848 gtcccatacattcttttgacggaggggatcaagactgtttgcagagttgcgatttgggca 6789
Query: 420 gcggaacgtgtgtgaatgtgtttggccctttctgacatgtacgccaacctcttttctaaa 479
|||||||||||||||| || ||||||| |||||||| |||||| ||| | |||||||
Sbjct: 6788 gcggaacgtgtgtgaa--tggttggccc-ttctgaca-gtacgctaac--cctttctaat 6735
Query: 480 gaaccgtgaggtatacgtkacaaggcat 507
||||||||| | |||||| | |||||||
Sbjct: 6734 gaaccgtgatgaatacgtgataaggcat 6707
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3474
Number of Sequences: 1807
Number of extensions: 3474
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 507
length of database: 10,358,551
effective HSP length: 16
effective length of query: 491
effective length of database: 10,329,639
effective search space: 5071852749
effective search space used: 5071852749
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)